Source code for pyomop.main

import click
import asyncio
from . import CdmEngineFactory
from . import CdmVocabulary
from . import metadata
from . import __version__


@click.command()
@click.option('--verbose', '-v', is_flag=True, help="Will print verbose messages.")
@click.option('--create', '-c', is_flag=True, help="Create CDM6 schema on the database.")
@click.option('--dbtype', '-t', multiple=False, default='sqlite',
              help='Database Type for creating CDM (sqlite, mysql or pgsql')
@click.option('--host', '-h', multiple=False, default='localhost',
              help='Database host')
@click.option('--port', '-p', multiple=False, default='5432',
              help='Database port')
@click.option('--user', '-u', multiple=False, default='root',
              help='Database user')
@click.option('--pw', '-w', multiple=False, default='pass',
              help='Database password')
@click.option('--name', '-n', multiple=False, default='cdm6.sqlite',
              help='Database name')
@click.option('--schema', '-s', multiple=False, default='public',
              help='Database schema (for pgsql)')
@click.option('--vocab', '-i', multiple=False, default='',
              help='Folder with vocabulary files (csv) to import')
def cli(verbose, create, dbtype, host, port, user, pw, name, schema, vocab):
    if verbose:
        print("verbose")
    if create:
        cdm = CdmEngineFactory(dbtype, host, port, user, pw, name, schema)
        # initialize default engine
        engine = cdm.engine
        asyncio.run(cdm.init_models(metadata))
    if vocab is not '':
        cdm = CdmEngineFactory(dbtype, host, port, user, pw, name, schema)
        _vocab = CdmVocabulary(cdm)
        _vocab.create_vocab(vocab)
        print("Done")

[docs]def main_routine(): click.echo("_________________________________________") click.echo("Pyomop v" + __version__ + " working:.....") cli() # run the main function click.echo("Pyomop done.")
if __name__ == '__main__': main_routine()